Cello_VPRGeneration_Paper_collection Version 1


Created by: Tramy Nguyen
Date created: 2018-05-16 23:15:27.934
Date modified: 2018-06-11 00:08:15

A collection containing 52 Cello circuits that were reconstructed by VPR model generation. Each circuit that was generated from VPR were converted into the SBML data model for verification of the design. The simulation result is plotted from iBioSim and a plot of the result is also found in each circuit's collection.




Nielsen, AA., Der, BS., Shin, J., Vaidyanathan, P., Paralanov, V., Strychalski, EA., Ross, D., Densmore, D., Voigt, CA., "Genetic circuit design automation.", Science (New York, N.Y.), 2016, Apr 01; 352(6281): aac7341, PMID: 27034378., DOI: 10.1126/science.aac7341.

Misirli, G., Nguyen, T., McLaughlin, JA., Vaidyanathan, P., Jones, TS., Densmore, D., Myers, C., Wipat, A., "A Computational Workflow for the Automated Generation of Models of Genetic Designs.", ACS synthetic biology, 2019, 07 19; 8(7): 1548-1559, PMID: 29782151., DOI: 10.1021/acssynbio.7b00459.

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